Plugin Lineage

From Endrov

Lineages are used to keep of particles, which can divide and merge over time. Particles can be cells, nuclei, or any other objects. It is possible associate dynamically changing values (think: gene expression levels) and surface outlines.

Divisions and expressions can also be shown in the Lineage Window.

File:NucImagewindow.png

File:NucModelwindow.png

File:Lineagewindow.png

Usage

See the Lineaging Tutorial

2D viewer:

  • Create a particle by dragging a circle in the right plane
  • Select particle by left-click. Ctrl can be used to select multiple
  • Active cell can be moved with icons appearing after selection
  • Moving a cell creates a keyframe
  • Many options are available by right-clicking after selection

3D viewer:

  • 3d lineaging, todo