Plugins
From Endrov and VWB
Contents |
Basic
For the user:
Low level:
Data formats
- OST
- LOCI Bio-Formats
- Acetree
- Basic imagesets importer
- OME integration - image database
- ImServ - OST database
Movie formats
Data Type Extensions
- Nucleus Lineage, Lineage Window
- Frame/Time
- Shell
- Image annotation
- Lines
- ChromaCount stats KJ
- Custom data
Processing
Image processing
Image Processing (old filters, all deprecated, pending rewrite)
These plugins are indexed by position in filter menu. Not all filters below are completed yet.
Enhance: Contrast & Brightness, Histogram equalize, Sharpen 2D, Deinterlace, Confocal X Shift, low-pass filter, high-pass filter, butterworth filter, custom linear filter, median filter, IJ smooth, IJ sharpen, IJ enhance contrast
Mathematical: Convolve 2D, Gaussian 2D, Laplacian of Gaussian (LoG) 2D, Windowed Mean 2D, MaxZ, SumZ, Add, Threshold, Gradient, Laplacian, Hessian, Canny, IJ find edges
Noise: Binomial, Exponential, Gamma, Gaussian, Poisson, Salt and Pepper, Uniform
Transforms: FFT, FFT^-1, Invert, Radon, Radon^-1, DCT, DCT^-1, Convolve, Deconvolve
Binary Morphology: Erode, Dilate, Close, Open, Outline, Skeletonize, Fill holes, Make distance map
Order Statistics: Median filter, Max filter, Min filter, order filter
Other:
